Class ClassificationResult

java.lang.Object
edu.msu.cme.rdp.classifier.ClassificationResult

public class ClassificationResult extends Object
This class holds the classification results for a query sequence.
  • Constructor Details

    • ClassificationResult

      public ClassificationResult(edu.msu.cme.rdp.readseq.readers.Sequence p, boolean reverse, List<RankAssignment> a, HierarchyVersion version)
      Creates a new instance of ClassificationResult. This class holds the classification results for a query sequence.
  • Method Details

    • getSequence

      public edu.msu.cme.rdp.readseq.readers.Sequence getSequence()
      Returns the query sequence
    • getAssignments

      public List<RankAssignment> getAssignments()
      Returns a list of RankAssignments. The assignments are returned in the order of taxonomic ranks, from the highest to the lowest.
    • getTrainsetNo

      public int getTrainsetNo()
      Returns the training set number of the taxonomy hierarchy from of the training file.
    • getHierarchyTrainsetNo

      public HierarchyVersion getHierarchyTrainsetNo()
      Returns the version of the taxonomy hierarchy from of the training file.
    • isReverse

      public boolean isReverse()