Package edu.msu.cme.rdp.classifier.cli
Class CmdOptions
java.lang.Object
edu.msu.cme.rdp.classifier.cli.CmdOptions
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Field Summary
FieldsModifier and TypeFieldDescriptionstatic final String
static final String
static final String
static final String
static final String
static final String
static final String
static final String
static final String
static float
static String
static final String
static final String
static final String
static final String
static final String
static final String
static final String
static final String
static final String
static final String
static final String
static final String
static final String
static final String
static final String
static final String
static final String
static final String
static final String
static final String
static final String
static final String
static final String
static final String
static final String
static final String
static final String
static final String
static final String
static final String
static final String
static final String
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Constructor Summary
Constructors -
Method Summary
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Field Details
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DEFAULT_FORMAT
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DEFAULT_CONF
public static float DEFAULT_CONF -
DEFAULT_GENE
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QUERYFILE_LONG_OPT
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OUTFILE_LONG_OPT
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TRAINPROPFILE_LONG_OPT
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FORMAT_LONG_OPT
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GENE_LONG_OPT
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MIN_BOOTSTRAP_WORDS_LONG_OPT
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HIER_OUTFILE_LONG_OPT
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BOOTSTRAP_LONG_OPT
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RANK_LONG_OPT
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TAXON_LONG_OPT
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BOOTSTRAP_OUTFILE_LONG_OPT
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SHORTSEQ_OUTFILE_LONG_OPT
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BIOMFILE_LONG_OPT
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SAMPLE_LONG_OPT
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METADATA_LONG_OPT
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QUERYFILE_SHORT_OPT
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OUTFILE_SHORT_OPT
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TRAINPROPFILE_SHORT_OPT
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FORMAT_SHORT_OPT
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GENE_SHORT_OPT
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MIN_BOOTSTRAP_WORDS_SHORT_OPT
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HIER_OUTFILE_SHORT_OPT
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BOOTSTRAP_SHORT_OPT
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RANK_SHORT_OPT
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TAXON_SHORT_OPT
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BOOTSTRAP_OUTFILE_SHORT_OPT
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SHORTSEQ_OUTFILE_SHORT_OPT
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BIOMFILE_SHORT_OPT
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METADATA_SHORT_OPT
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QUERYFILE_DESC
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OUTFILE_DESC
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TRAINPROPFILE_DESC
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FORMAT_DESC
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GENE_DESC
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MIN_WORDS_DESC
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HIER_OUTFILE_DESC
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BOOTSTRAP_DESC
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BOOTSTRAP_OUTFILE_DESC
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SHORTSEQ_OUTFILE_DESC
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BIOMFILE_DESC
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METADATA_DESC
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Constructor Details
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CmdOptions
public CmdOptions()
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