Package picard.illumina.parser.readers
Class AbstractIlluminaPositionFileReader.PositionInfo
java.lang.Object
picard.illumina.parser.readers.AbstractIlluminaPositionFileReader.PositionInfo
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AbstractIlluminaPositionFileReader
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Field Summary
FieldsModifier and TypeFieldDescriptionfinal int
The lane, which is determined from the file namefinal int
The tile, which is determined from the file namefinal float
The x-position as it occurs in the file being readfinal int
The QSeq style x-coordinat, an integer = Math.round(xPos*10 + 1000)final float
The y-position as it occurs in the file being readfinal int
The QSeq style y-coordinates, an integer = Math.round(yPos*10 + 1000) -
Constructor Summary
Constructors -
Method Summary
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Field Details
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xPos
public final float xPosThe x-position as it occurs in the file being read -
yPos
public final float yPosThe y-position as it occurs in the file being read -
lane
public final int laneThe lane, which is determined from the file name -
tile
public final int tileThe tile, which is determined from the file name -
xQseqCoord
public final int xQseqCoordThe QSeq style x-coordinat, an integer = Math.round(xPos*10 + 1000) -
yQseqCoord
public final int yQseqCoordThe QSeq style y-coordinates, an integer = Math.round(yPos*10 + 1000)
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Constructor Details
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PositionInfo
public PositionInfo(float x, float y, int lane, int tile)
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Method Details